Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817660.1_cds_XP_016499279.1_13220
CDS Infomation

[gene=LOC107817900] [db_xref=GeneID:107817900] [protein=glucan endo-1,3-beta-glucosidase 2-like] [protein_id=XP_016499279.1] [location=complement(join(423419..423572,423751..423778,423886..425139,427075..427141))] [gbkey=CDS]
Sequence

ATGGAAAATAACAGGGCTTTGCTTTTCTTGCTGTTTTTAGCTGTTTCTGCAGTTTTTGCT
GATGAAGATGTCTTTATTGGTGTGAACATTGGAACAGAACTTTCGGACATGCCTCATCCA
ACTCAAGTAGTTGCACTTCTTAAAGCTCAGCAAATTCGACATGTCCGACTCTTCAATGCA
GATCGCGGCATGCTCCTTGCACTTGCAAATTCAGGCATAAAAGTTGCTGTTTCCGTGCCC
AACGAACAGCTCCTTGCTGTTGGTCAATCAAATGCTACTGCCGCTAATTGGGTTGCTCAA
AATGTTGTTTCGCATTATCCAGCTACCAACATCACAACTATTTGTGTTGGTTCCGAGGTT
CTATCCGCCCTGCCAAATGCTGCATCTATCCTCAACAATGCCCTTAAGTTCATCCATTCA
GCGCTCGTGGCATCTAACCTGGATAGGCAAATAAAAGTTTCAACGCCTCTAGCTTCTTCC
ATCATCCTCGACTCGTTTCCTCCATCTCAGGCCTTCTTCAATCACACTCTGAAACCAGTA
TTAGTACCAATGCTGAAATTCCTGCAATCCACTGGTTCTTATTTCATGCTAAATGTGTAT
CCTTATTACGACTACATGCTATCCAACGGTGTTATTCCACTAGATTATGCTCTCTTCAGG
CCCCTAGCTGCAAATAAAGAAGCAGTGGACTCCAACACACTTTTGCATTATACTAACGTC
TTTGATGCAATGGTTGATGCTGCTTACTTTGCTATGCTTGATCTCAATTTCACTAATATT
CCAGTTATGGTGACTGAATCGGGCTGGCCATCACAGGGCGACTCCGATGAACCTGATGCT
ACTTTAGACAATGCCAACACGTACAACAGCAATCTGATAAAGCATGTCCTAAACAAAACC
GGAACTCCTAAGCATCCCGGTATTGCTGTTAGTACGTACATCTACGAGCTATACAATGAG
GACAATAAGCCAGGGCATTTGTCAGAGAAGAATTGGGGATTATTTAATGCCAACGGCACA
CCAGTTTATATTCTACGCTTGACTGAATCAGGGTCTATGTTTGCAAATGATACTTCGAAT
CAGACTTATTGTGCTGCCAAAGACGGGGCAGATTCTAAAATGCTACAAGCTGCTTTGGAT
TGGGCTTGCGGACCTGGTAAGGTGGATTGTTCAGCGTTGTTGCAGGGGGAACCGTGTTAT
GAACCAGATAATGTCGCTGCACACGCTACCTATGCTTTTGATGCCTACTATCACATGATG
GGTAGGGCTCCTGGGACTTGTGACTTCAACGGGGTAGCTACTATCACCACAACAAATCCA
AGTCATGGTTCTTGTGTATTTTCTGGAAGTCTTGGCAGAAACGGCACTTTTCTAAATGGC
ACGGCTCCAGCTATGGATTCTACGACTTCATCAGCTTCTCCTGCTCGGTATTTAAACAAC
AATGCCTATTCAACAATGCTGACAATTCTGGGAATTCTTGTATGGAGCATGAATCTATTG
TAG

Peptide Sequence

PEP ID

XP_016499279.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Nicotiana tabacum]
Sequence

MENNRALLFLLFLAVSAVFADEDVFIGVNIGTELSDMPHPTQVVALLKAQQIRHVRLFNA
DRGMLLALANSGIKVAVSVPNEQLLAVGQSNATAANWVAQNVVSHYPATNITTICVGSEV
LSALPNAASILNNALKFIHSALVASNLDRQIKVSTPLASSIILDSFPPSQAFFNHTLKPV
LVPMLKFLQSTGSYFMLNVYPYYDYMLSNGVIPLDYALFRPLAANKEAVDSNTLLHYTNV
FDAMVDAAYFAMLDLNFTNIPVMVTESGWPSQGDSDEPDATLDNANTYNSNLIKHVLNKT
GTPKHPGIAVSTYIYELYNEDNKPGHLSEKNWGLFNANGTPVYILRLTESGSMFANDTSN
QTYCAAKDGADSKMLQAALDWACGPGKVDCSALLQGEPCYEPDNVAAHATYAFDAYYHMM
GRAPGTCDFNGVATITTTNPSHGSCVFSGSLGRNGTFLNGTAPAMDSTTSSASPARYLNN
NAYSTMLTILGILVWSMNLL

Transcript Sequence

Gene sequence data has not been registered.